1 R yükleme

1.1 R-project

https://cran.r-project.org/

1.2 RStudio

https://www.rstudio.com/

https://www.rstudio.com/products/rstudio/download/

1.2.1 RStudio eklentileri

Discover and install useful RStudio addins

https://cran.r-project.org/web/packages/addinslist/README.html

https://rstudio.github.io/rstudioaddins/

devtools::install_github("rstudio/addinexamples", type = "source")

Downloading GitHub repo rstudio/addinexamples@master
from URL https://api.github.com/repos/rstudio/addinexamples/zipball/master
Installing addinexamples
Downloading GitHub repo rstudio/rstudioapi@master
from URL https://api.github.com/repos/rstudio/rstudioapi/zipball/master
Installing rstudioapi
'/Library/Frameworks/R.framework/Resources/bin/R' --no-site-file --no-environ  \
  --no-save --no-restore --quiet CMD INSTALL  \
  '/private/var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T/Rtmp1RuAIh/devtools117cf118cf1ae/rstudio-rstudioapi-d12cbc1'  \
  --library='/Library/Frameworks/R.framework/Versions/3.5/Resources/library'  \
  --install-tests 

* installing *source* package ‘rstudioapi’ ...
** R
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (rstudioapi)
'/Library/Frameworks/R.framework/Resources/bin/R' --no-site-file --no-environ  \
  --no-save --no-restore --quiet CMD INSTALL  \
  '/private/var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T/Rtmp1RuAIh/devtools117cf4d90ae96/rstudio-addinexamples-fae9609'  \
  --library='/Library/Frameworks/R.framework/Versions/3.5/Resources/library'  \
  --install-tests 

* installing *source* package ‘addinexamples’ ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (addinexamples)

1.3 X11

https://www.xquartz.org/

1.4 Java OS

https://support.apple.com/kb/dl1572

2 R paket yükleme

install.packages("tidyverse", dependencies = TRUE)

URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.5/tidyverse_1.2.1.tgz' deneniyor
Content type 'application/x-gzip' length 88754 bytes (86 KB)
==================================================
downloaded 86 KB


The downloaded binary packages are in
    /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//Rtmp1RuAIh/downloaded_packages

install.packages("jmv", dependencies = TRUE)

URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.5/jmv_0.8.6.2.tgz' deneniyor
Content type 'application/x-gzip' length 2584310 bytes (2.5 MB)
==================================================
downloaded 2.5 MB


The downloaded binary packages are in
    /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//Rtmp1RuAIh/downloaded_packages

install.packages("questionr", dependencies = TRUE)

also installing the dependency ‘memisc’

URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.5/memisc_0.99.14.9.tgz' deneniyor
Content type 'application/x-gzip' length 2334942 bytes (2.2 MB)
==================================================
downloaded 2.2 MB

URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.5/questionr_0.6.2.tgz' deneniyor
Content type 'application/x-gzip' length 1602152 bytes (1.5 MB)
==================================================
downloaded 1.5 MB


The downloaded binary packages are in
    /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//Rtmp1RuAIh/downloaded_packages

install.packages("Rcmdr", dependencies = TRUE)

URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.5/Rcmdr_2.4-4.tgz' deneniyor
Content type 'application/x-gzip' length 4984686 bytes (4.8 MB)
==================================================
downloaded 4.8 MB


The downloaded binary packages are in
    /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//Rtmp1RuAIh/downloaded_packages

require(tidyverse)

Zorunlu paket yükleniyor: tidyverse
[37m── [1mAttaching packages[22m ───────────────────────────────────────── tidyverse 1.2.1 ──[39m
[37m[32m✔[37m [34mggplot2[37m 3.0.0     [32m✔[37m [34mpurrr  [37m 0.2.5
[32m✔[37m [34mtibble [37m 1.4.2     [32m✔[37m [34mdplyr  [37m 0.7.6
[32m✔[37m [34mtidyr  [37m 0.8.1     [32m✔[37m [34mstringr[37m 1.3.1
[32m✔[37m [34mreadr  [37m 1.1.1     [32m✔[37m [34mforcats[37m 0.3.0[39m
package ‘dplyr’ was built under R version 3.5.1[37m── [1mConflicts[22m ──────────────────────────────────────────── tidyverse_conflicts() ──
[31m✖[37m [34mdplyr[37m::[32mfilter()[37m masks [34mstats[37m::filter()
[31m✖[37m [34mdplyr[37m::[32mlag()[37m    masks [34mstats[37m::lag()[39m

require(jmv)

Zorunlu paket yükleniyor: jmv

Attaching package: ‘jmv’

The following object is masked from ‘package:stats’:

    anova

require(questionr)

Zorunlu paket yükleniyor: questionr

library(Rcmdr)

Zorunlu paket yükleniyor: splines
Zorunlu paket yükleniyor: RcmdrMisc
Zorunlu paket yükleniyor: car
Zorunlu paket yükleniyor: carData

Attaching package: ‘car’

The following object is masked from ‘package:dplyr’:

    recode

The following object is masked from ‘package:purrr’:

    some

Zorunlu paket yükleniyor: sandwich

Attaching package: ‘RcmdrMisc’

The following object is masked from ‘package:jmv’:

    reliability

Zorunlu paket yükleniyor: effects
lattice theme set by effectsTheme()
See ?effectsTheme for details.

RcmdrMsg: [1] NOTE: R Commander Version 2.4-4: Wed Jul 11 17:17:06 2018


Rcmdr Version 2.4-4


Attaching package: 'Rcmdr'

The following object is masked from 'package:car':

    Confint

3 R studio ile proje oluşturma

https://support.rstudio.com/hc/en-us/articles/200526207-Using-Projects

4 RStudio ile veri yükleme

https://support.rstudio.com/hc/en-us/articles/218611977-Importing-Data-with-RStudio

4.1 Excel

4.2 SPSS

4.3 csv

5 Veriyi görüntüleme

Spreadsheet users using #rstats: where's the data?#rstats users using spreadsheets: where's the code?
— Leonard Kiefer (@lenkiefer) July 7, 2018

summary()

View(data)

data

head

tail

glimpse

str

skimr::skim()

6 Veriyi değiştirme

6.1 Veriyi kod ile değiştirelim

6.2 Veriyi eklentilerle değiştirme

7 RStudio aracılığıyla recode

questionr paketi kullanılacak

https://juba.github.io/questionr/articles/recoding_addins.html

8 Basit tanımlayıcı istatistikler

summary() mean median min max sd table()

irisdata <- read_csv("data/iris.csv")

Parsed with column specification:
cols(
  Sepal.Length = col_double(),
  Sepal.Width = col_double(),
  Petal.Length = col_double(),
  Petal.Width = col_double(),
  Species = col_character()
)

9 Rcmdr

library(Rcmdr)

10 Sonraki Konular

RStudio ile GitHub
Hipotez testleri
R Markdown ve R Notebook ile tekrarlanabilir rapor

11 Diğer kodlar

Diğer kodlar için bakınız: https://sbalci.github.io/

12 Geri Bildirim

Geri bildirim için tıklayınız: Geri bildirim formu

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

R ile analize başlarken

Serdar Balcı, MD, Pathologist

2018-07-11